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Propagating Organization: An Enquiry

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References

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  17. Monod, Jacques (1971), Chance and Necessity: An Essay on the Natural Philosophy of Modern Biology (trans. A. Wainhouse), New York: Knopf.
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  19. Schrödinger, Erwin ([1944] 1992), What is Life?: The Physical Aspect of the Living Cell, Cambridge: Cambridge University Press.
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  21. Shannon, Claude Elwood (1948), ‘A mathematical theory of communication’, Bell System Technical Journal, 27:3 (July and October), pp. 379–423, 623–56.
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  22. Shiryayev, Albert Nikolayevich (ed.) (1993), ‘Selected works of A. N. Kolmogorov’, Information Theory and the Theory of Algorithms, vol. III, Dordrecht: Kluwer Academic Publishing.
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  23. Shmulevich, Ilya , Kauffman Stuart A. and Aldana, Maximo (2005), ‘Eukaryotic cells are dynamically ordered or critical but not chaotic’, Proceedings of the National Academy of Sciences, 102:38, pp. 13439–444.
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  24. Sievers, Dane and von Kiedrowski, Günter (1994) ‘Self-replication of complementary nucleotide-based oligomers’, Nature, 369:6477, pp. 221–24.
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  25. Silberstein, Michael (2003), ‘Reduction, emergence and explanation’, in P. Machamer and M. Silberstein (eds), The Blackwell Guide of the Philosophy of Science, Malden, MA: Blackwell Publishers Inc.
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  26. Smith, Eric and Morowitz, Harold J. (2004), ‘Universality in intermediary metabolism’, Proceedings of the National Academy of Sciences, 101:36 (7 September), pp. 13168–73, https://www.pnas.org/content/101/36/13168. Accessed 5 April 2023.
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  27. Sterelny, Kim and Griffiths, Paul E. (1999), Sex and Death: An Introduction to Philosophy of Biology, Chicago: University of Chicago.
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References

  1. Apter, M. J. and Wolpert, Lewis (1965), ‘Cybernetics and development I. Information theory’, Journal of Theoretical Biology, 8:2, pp. 244–57.
     [Google Scholar]
  2. Hayles, N. Katherine (1999), ‘The condition of virtuality’, in P. Lunenfeld (ed.), The Digital Dialectic: New Essays on New Media, Cambridge, MA: MIT Press, pp. 68–94.
     [Google Scholar]
  3. Hood, Leroy and Galas, David (2003), ‘The digital code of DNA’, Nature, 421:6921, pp. 444–48.
     [Google Scholar]
  4. Kant, Immanuel ([1790] 1951), Critique of Judgement (trans. J. H. Bernard), New York: Hafner Press, p. 221.
     [Google Scholar]
  5. Kauffman, Stuart A. (1993), The Origins of Order: Self-organization and Selection in Evolution, New York: Oxford University Press.
     [Google Scholar]
  6. Kauffman, Stuart A. (2000), Investigations, Oxford: Oxford University Press.
     [Google Scholar]
  7. Kauffman, Stuart A. (2006), ‘Beyond reductionism: Reinventing the sacred’, Edge.org, 12 November, https://www.edge.org/conversation/stuart_a_kauffman-beyond-reductionism-reinventing-the-sacred. Accessed 5 April 2023.
     [Google Scholar]
  8. Kauffman, Stuart A. and Clayton, Philip (2006), ‘On emergence, agency, and organization’, Biology and Philosophy, 21, pp. 501–21.
     [Google Scholar]
  9. Kesseli, Juha , Ribeiro , Andre S. and Nykter, Matti (2009), ‘Measuring information propagation and processing in biological systems’, in S. Niiranen , J. Yli-Hietanen and A. Lugmayr (eds), Open Information Management: Applications of Interconnectivity and Collaboration, Hershey, PA: IGI Global, pp. 190–226.
     [Google Scholar]
  10. Lee, David H. , Severin, Kay and Ghadiri, M. Reza (1997a), ‘Autocatalytic networks: The transition from molecular self-replication to molecular ecosystems’, Current Opinion in Chemical Biology, 1, pp. 491–96.
     [Google Scholar]
  11. Lee, David H. , Severin, Kay , Yokobayashi, Yohei and Ghadiri, M. Reza (1997b), ‘Emergence of symbiosis in peptide self-replication through a hypercyclic network’, Nature, 390:6660, pp. 591–94.
     [Google Scholar]
  12. Logan, Robert K. (2006), ‘The extended mind model of the origin of language and culture’, in N. Gontier , J. P. Van Bendegem and D. Aerts (eds), Evolutionary Epistemology, Language and Culture, Dordrecht: Springer, pp. 149–67.
     [Google Scholar]
  13. Logan, Robert K. (2007), The Extended Mind: The Origin of Language and Culture, Toronto: University of Toronto.
     [Google Scholar]
  14. Mavelli, Fabio and Luisi, Pier Luigi (1996), ‘Autopoietic self-reproducing vesicles: A simplified kinetic model’, Journal of Physical Chemistry, 100:41, pp. 16600–607.
     [Google Scholar]
  15. Maynard Smith, John (2000a), ‘The concept of information in biology’, Philosophy of Science, 67:2, pp. 177–94.
     [Google Scholar]
  16. Maynard Smith, John (2000b), ‘Reply to commentaries’, Philosophy of Science, 67, pp. 214–18.
     [Google Scholar]
  17. Monod, Jacques (1971), Chance and Necessity: An Essay on the Natural Philosophy of Modern Biology (trans. A. Wainhouse), New York: Knopf.
     [Google Scholar]
  18. Rämö, Pauli , Kesseli, Juha and Yli-Harja, Olli P. (2006), ‘Perturbation avalanches and criticality in gene regulatory networks’, Journal of Theoretical Biology, 242:1, pp. 164–70.101
     [Google Scholar]
  19. Schrödinger, Erwin ([1944] 1992), What is Life?: The Physical Aspect of the Living Cell, Cambridge: Cambridge University Press.
     [Google Scholar]
  20. Serra, Roberto , Villani, Marco and Semeria, Alessandro (2004), ‘Genetic network models and statistical properties of gene expression data in knock-out experiments’, Journal of Theoretical Biology, 227:1, pp. 149–57.
     [Google Scholar]
  21. Shannon, Claude Elwood (1948), ‘A mathematical theory of communication’, Bell System Technical Journal, 27:3 (July and October), pp. 379–423, 623–56.
     [Google Scholar]
  22. Shiryayev, Albert Nikolayevich (ed.) (1993), ‘Selected works of A. N. Kolmogorov’, Information Theory and the Theory of Algorithms, vol. III, Dordrecht: Kluwer Academic Publishing.
     [Google Scholar]
  23. Shmulevich, Ilya , Kauffman Stuart A. and Aldana, Maximo (2005), ‘Eukaryotic cells are dynamically ordered or critical but not chaotic’, Proceedings of the National Academy of Sciences, 102:38, pp. 13439–444.
     [Google Scholar]
  24. Sievers, Dane and von Kiedrowski, Günter (1994) ‘Self-replication of complementary nucleotide-based oligomers’, Nature, 369:6477, pp. 221–24.
     [Google Scholar]
  25. Silberstein, Michael (2003), ‘Reduction, emergence and explanation’, in P. Machamer and M. Silberstein (eds), The Blackwell Guide of the Philosophy of Science, Malden, MA: Blackwell Publishers Inc.
     [Google Scholar]
  26. Smith, Eric and Morowitz, Harold J. (2004), ‘Universality in intermediary metabolism’, Proceedings of the National Academy of Sciences, 101:36 (7 September), pp. 13168–73, https://www.pnas.org/content/101/36/13168. Accessed 5 April 2023.
     [Google Scholar]
  27. Sterelny, Kim and Griffiths, Paul E. (1999), Sex and Death: An Introduction to Philosophy of Biology, Chicago: University of Chicago.
     [Google Scholar]

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